{
  "_id": "6a1020aeacfb0bcc41c8bb72",
  "Package": "PlateVision",
  "Title": "Automated qPCR Analysis and Visual Quality Control",
  "Version": "0.1.0",
  "Authors@R": "person(given = \"Shubham\",\nfamily = \"Love\",\nrole = c(\"aut\", \"cre\"),\nemail = \"shubhamlove2101@gmail.com\")",
  "Description": "Directly pipes raw quantitative PCR (qPCR) machine outputs\ninto downstream analyses using the comparative Ct (Delta-Delta\nCt) method described by Livak and Schmittgen (2001)\n<doi:10.1006/meth.2001.1262>. Streamlines the workflow from\n'Excel' export to publication-ready plots. Integrates unique\nvisual quality control by reconstructing 96-well plate\nheatmaps, allowing users to instantly detect pipetting errors,\nedge effects, and outliers. Key features include automated\nerror propagation, laboratory master mix calculations, and\ngeneration of bar charts and volcano plots.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.3",
  "Config/testthat/edition": "3",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-22 09:20:47 UTC",
    "User": "root"
  },
  "Author": "Shubham Love [aut, cre]",
  "Maintainer": "Shubham Love <shubhamlove2101@gmail.com>",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev",
  "Repository": "https://probablyshubham.r-universe.dev",
  "Date/Publication": "2025-12-22 18:48:51 UTC",
  "RemoteUrl": "https://github.com/cran/PlateVision",
  "RemoteRef": "HEAD",
  "RemoteSha": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
  "MD5sum": "2d206752508699447dcb13f06c527a4a",
  "_user": "probablyshubham",
  "_type": "src",
  "_file": "PlateVision_0.1.0.tar.gz",
  "_fileid": "4c51069d945ff39fe29e10c3e3f3ea09bb998c9188b781785dc8b2656bad2c75",
  "_filesize": 111979,
  "_sha256": "4c51069d945ff39fe29e10c3e3f3ea09bb998c9188b781785dc8b2656bad2c75",
  "_created": "2026-05-22T09:20:47.000Z",
  "_published": "2026-05-22T09:23:58.299Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77351957411,
      "time": 129,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7157173599"
    },
    {
      "job": 77351957414,
      "time": 153,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157181746"
    },
    {
      "job": 77351957488,
      "time": 103,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7157166935"
    },
    {
      "job": 77351957457,
      "time": 85,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157160410"
    },
    {
      "job": 77351467967,
      "time": 190,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157133290"
    },
    {
      "job": 77351957514,
      "time": 125,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157172845"
    },
    {
      "job": 77351957524,
      "time": 97,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7157164152"
    },
    {
      "job": 77351957449,
      "time": 102,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7157165716"
    },
    {
      "job": 77351957463,
      "time": 87,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157161072"
    }
  ],
  "_buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/PlateVision",
  "_commit": {
    "id": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
    "author": "Shubham Love <shubhamlove2101@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.0\n",
    "time": 1766429331
  },
  "_maintainer": {
    "name": "Shubham Love",
    "email": "shubhamlove2101@gmail.com",
    "login": "probablyshubham",
    "description": "",
    "uuid": 140484759
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "readxl",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "plotly",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-52",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.1.0",
      "date": "2025-12-22"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "probablyshubham",
      "count": 1,
      "uuid": 140484759
    }
  ],
  "_userbio": {
    "uuid": 140484759,
    "type": "user",
    "name": "ProbablyShubham"
  },
  "_downloads": {
    "count": 485,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/PlateVision"
  },
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/PlateVision.html",
    "manual.pdf"
  ],
  "_realowner": "probablyshubham",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2025-12-22"
    }
  ],
  "_exports": [
    "calculate_ddct",
    "calculate_reagents",
    "check_replicates",
    "import_plate",
    "plot_bars",
    "plot_volcano",
    "view_plate"
  ],
  "_help": [
    {
      "page": "calculate_ddct",
      "title": "Calculate ddCt Statistics",
      "topics": [
        "calculate_ddct"
      ]
    },
    {
      "page": "calculate_reagents",
      "title": "Calculate Master Mix Reagents",
      "topics": [
        "calculate_reagents"
      ]
    },
    {
      "page": "check_replicates",
      "title": "Check Technical Replicates",
      "topics": [
        "check_replicates"
      ]
    },
    {
      "page": "import_plate",
      "title": "Import and Merge PCR Data",
      "topics": [
        "import_plate"
      ]
    },
    {
      "page": "plot_bars",
      "title": "Plot Fold Change (Bar Chart)",
      "topics": [
        "plot_bars"
      ]
    },
    {
      "page": "plot_volcano",
      "title": "Plot Volcano (Log2FC vs P-value)",
      "topics": [
        "plot_volcano"
      ]
    },
    {
      "page": "view_plate",
      "title": "Visualize Plate Layout (Heatmap)",
      "topics": [
        "view_plate"
      ]
    }
  ],
  "_rundeps": [
    "askpass",
    "base64enc",
    "bslib",
    "cachem",
    "cellranger",
    "cli",
    "cpp11",
    "crayon",
    "crosstalk",
    "curl",
    "data.table",
    "digest",
    "dplyr",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "highr",
    "hms",
    "htmltools",
    "htmlwidgets",
    "httr",
    "isoband",
    "jquerylib",
    "jsonlite",
    "knitr",
    "labeling",
    "later",
    "lazyeval",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "openssl",
    "otel",
    "pillar",
    "pkgconfig",
    "plotly",
    "prettyunits",
    "progress",
    "promises",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "readxl",
    "rematch",
    "rlang",
    "rmarkdown",
    "S7",
    "sass",
    "scales",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "xfun",
    "yaml"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "platevision",
  "_universes": [
    "probablyshubham"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-22T09:22:58.000Z",
      "distro": "noble",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "086c6947cd9ee409f30aa9c5c3b3a5298f642522ce460bb1d5a90dd34a5a4545",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-22T09:23:16.000Z",
      "distro": "noble",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "1e5b7dde6a7e93c2cc0eaa1186454d052b79549b8368cfab4c38ee06d4098898",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-22T09:22:38.000Z",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "46b9df493a5c2754d01cfdfa9aa15577677094d93df1acbf4a9898c55b4f9f7a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-22T09:22:20.000Z",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "60a60e46d46aa600a6c4f9e09a142ffa59702aa63bcb87d4bce28dff9b46621c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-05-22T09:23:10.000Z",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "4fde6d3311c4b1d79c8eca910351542e86c5ac7db53b5202b0e05bab94e87765",
      "status": "success",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-22T09:22:18.000Z",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "5a93bb73f64cf5836f9b4499272d1cd50325150301d0667101575a6f60853fa7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-22T09:22:26.000Z",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "8b8a5bef8449b4eb58231234631a13f10dea6977e30b5ea6e9bcc2c785b4c453",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-22T09:22:08.000Z",
      "commit": "9829849b1837b2c0de6bce8fd9ea7e10545fd4d1",
      "fileid": "251e220aef0a91f28cde7615f2ed5ef1d8714f912f7a9f5fe386f6d7fa7eb07f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/probablyshubham/actions/runs/26279351267"
    }
  ]
}